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mm:parameters:lipids:example_page

Phospholipids

The following charge parameters for 12 distinct phospholipids were determined, following an AMBER compatible approach. These parameters were validated by building a bilayer system for each phospholipid type and by comparing structural and dynamical values with experimental data available. Some validation results are displayed at the end of the page, and for the DOPC phospholipid a good correlation with experimental available data was obtained.

DLPC

1,2-dilauroyl-sn-glycero-3-phosphocholine

link_para_a_imagem 1,2-dilauroyl-sn-glycero-3-phosphocholine
12:0/12:0
frcmod, prepc
Reference

DMPC

1,2-dimyristoyl-sn-glycero-3-phosphocholine

link_para_a_imagem 1,2-dimyristoyl-sn-glycero-3-phosphocholine
14:0/14:0
frcmod, prepc
Reference

DPPC

1,2-dipalmitoyl-sn-glycero-3-phosphocholine

link_para_a_imagem 1,2-dipalmitoyl-sn-glycero-3-phosphocholine
16:0/16:0
frcmod, prepc
Reference

1,2-dioleoyl-sn-glycero-3-phosphocholine - DOPC

link_para_a_imagem DOPC
CONTEUDO2
CONTEUDO3

1-palmitoyl,2-oleoyl-sn-glycero-3-phosphocholine - POPC

link_para_a_imagem POPC
CONTEUDO2
CONTEUDO3

1-palmitoyl-2-linoleoyl-sn-glycero-phosphocholine ????? - PLPC

link_para_a_imagem PLPC
CONTEUDO2
CONTEUDO3

1,2-dilauroyl-sn-glycero-3-phosphoethanolamine - DLPE

link_para_a_imagem DLPE
CONTEUDO2
CONTEUDO3

1,2-dimyristoyl-sn-glycero-3-phosphoethanolamine - DMPE

link_para_a_imagem DMPE
CONTEUDO2
CONTEUDO3

1,2-dipalmitoyl-sn-glycero-3-phosphoethanolamine - DPPE

link_para_a_imagem DPPE
CONTEUDO2
CONTEUDO3

1,2-distearoyl-sn-glycero-3-phosphoethanolamine - DSPE

link_para_a_imagem DSPE
CONTEUDO2
CONTEUDO3

1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine - POPE

link_para_a_imagem POPE
CONTEUDO2
CONTEUDO3

1-palmitoyl-2-linoleoyl-sn-glycero-phosphoethanolamine ????? - PLPE

link_para_a_imagem PLPE
CONTEUDO2
CONTEUDO3

References

Coimbra, J.T.S.; Sousa, S.F.; Fernandes, P.A.; Rangel, M.; Ramos, M.J.. Biomembrane simulations of 12 lipid types using the general amber force field in a tensionless ensemble . J. Biomol. Struct. Dyn., 2013

mm/parameters/lipids/example_page.txt · Last modified: 2013/07/25 19:24 by joaocoimbra