Selected Publications
Please find below a selection of my publications, divided by date and updated at 14/Jun/2019
You can also find my publications at Google Scholar, in the ISI Web of Knowledge or in ORCID.
2018-2020| 2015-2017 | 2013-2014 | 2011-2012 | 2009-2010 | 2007-2008 | 2005-2006 | 2003-2004 | Before 2003|
Publications 2003-200410. Fernandes, P. A., Carvalho, A. T. P., Marques, A. T., Pereira, A. L. F., Madeira, A. P. S., Ribeiro, A. S. P., . . . Ramos, M. J. (2003). New designs for MRI contrast agents. Journal of Computer-Aided Molecular Design, 17(7), 463-473. doi:10.1023/a:1027347527385
11. Fernandes, P. A., & Ramos, M. J. (2003). Theoretical studies on the mode of inhibition of ribonucleotide reductase by 2 '-substituted substrate analogues. Chemistry-a European Journal, 9(23), 5916-5925. doi:10.1002/chem.200304948
12. Fernandes, P. A., & Ramos, M. J. (2003). Theoretical studies on the mechanism of inhibition of ribonucleotide reductase by (E)-2 '-fluoromethylene-2 '-deoxycitidine-5 '-diphosphate. Journal of the American Chemical Society, 125(20), 6311-6322. doi:10.1021/ja0208613
13. Lucas, M. D., Fernandes, P. A., Eriksson, L. A., & Ramos, M. J. (2003). Pyruvate formate lyase: A new perspective. Journal of Physical Chemistry B, 107(24), 5751-5757. doi:10.1021/jp0223096
14. Silva, P. J., Fernandes, P. A., & Ramos, M. J. (2003). A theoretical study of radical-only and combined radical/carbocationic mechanisms of arachidonic acid cyclooxygenation by prostaglandin H synthase. Theoretical Chemistry Accounts, 110(5), 345-351. doi:10.1007/s00214-003-0476-9
15. Cerqueira, N., Femandes, P. A., Eriksson, L. A., & Ramos, M. J. (2004). New insights into a critical biological control step of the mechanism of Ribonucleotide reductase. Journal of Molecular Structure-Theochem, 709(1-3), 53-65. doi:10.1016/j.theochem.2003.10.073
16. Cerqueira, N., Fernandes, P. A., Eriksson, L. A., & Ramos, M. J. (2004). Ribonucleotide activation by enzyme ribonucleotide reductase: Understanding the role of the enzyme. Journal of Computational Chemistry, 25(16), 2031-2037. doi:10.1002/jcc.20127
17. Fernandes, P. A., Cruz, A. I. S., Maia, A. R. R., Almeida, A. A. S., da Silva, A. M. N., Silva, B. F. B., . . . Ramos, M. J. (2004). Design of 2-cyclopentenone derivatives with enhanced NF-kappa B: DNA binding inhibitory properties. Journal of Molecular Structure-Theochem, 685(1-3), 73-82. doi:10.1016/j.theochem.2004.06.027
18. Fernandes, P. A., & Ramos, M. J. (2004). Theoretical insights into the mechanism for thiol/disulfide exchange. Chemistry-a European Journal, 10(1), 257-266. doi:10.1002/chem.200305343
19. Pereira, S., Fernandes, P. A., & Ramos, M. J. (2004). Mechanism for ribonucleotide reductase inactivation by the anticancer drug gemcitabine. Journal of Computational Chemistry, 25(10), 1286-1294. doi:10.1002/jcc.20054
20. Pereira, S., Fernandes, P. A., & Ramos, M. J. (2004). Theoretical study of ribonucleotide reductase mechanism-based inhibition by 2 '-azido-2 '-deoxyribonucleoside 5-diphosphates. Journal of Computational Chemistry, 25(2), 227-237. doi:10.1002/jcc.10375
21. Ramos, M. J., Fernandes, P. A., & Melo, A. (2004). Modeling chemical and biological systems: A successful course for undergraduate students. Journal of Chemical Education, 81(1), 72-75. doi:10.1021/ed081p72